PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023516795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 311aa MW: 35921.3 Da PI: 9.1919 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 116 | 5e-36 | 86 | 231 | 2 | 135 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec.eaesssssas.. 83 k+drhski T +g+RdRR+Rls+++a++fF Lqd+LG+dk+skt+eWLl qa ++ik+l + + ++++ +s + XP_023516795.1 86 SSKRDRHSKIDTLRGPRDRRMRLSLPVAREFFGLQDMLGVDKASKTVEWLLFQARHEIKKLSCHdrggngdmrsP------SiSDGEVVSGIDet 174 579***********************************************************9977765543321......22333333333322 PP TCP 84 .nsssg........kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135 + ++a++++k+ + +++ + lake r+kararar rt ek+ ++ k XP_023516795.1 175 iV---NskidmkesRKANKKEKRGRVVRKT-TYYPLAKECREKARARARARTIEKQLQSGK 231 20...1444455434444444444444444.589*********************988766 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 311 aa Download sequence |
MFLFNANDSI SFPDHSFLHF PSPFHDDPTL HQNDTLLHQI LLNEPPANFV SDFGSESTRI 60 IVDDEHHHRV HQSLIMEQPI QRKQASSKRD RHSKIDTLRG PRDRRMRLSL PVAREFFGLQ 120 DMLGVDKASK TVEWLLFQAR HEIKKLSCHD RGGNGDMRSP SISDGEVVSG IDETIVNSKI 180 DMKESRKANK KEKRGRVVRK TTYYPLAKEC REKARARARA RTIEKQLQSG KKTLSSDQTN 240 TNKQIEGRIQ DVIRTSSSWS TQIDDQQLRT RNDETDDGLM MMGRWSQEHP FGDFQFFGKP 300 WEPDNNHGIC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18550.2 | 7e-25 | TCP family protein |