PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516576.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 285aa    MW: 31240.3 Da    PI: 9.1275
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.1e-09133179555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_023516576.1 133 HSLAERVRRQKISQRMKVLQTLVPGC----HKVTGKALMLDEIINYVQSLQ 179
                     999**********************9....566*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MNNSQFLPSP DSFALSKMNP CSWELEEAPQ IPHFHHLLPP QIQSSSVQQT AHHHHLPPRI  60
LPTATNPLPS SHSLSPSKED PNERGGDGKR RGYKRAKAGG GRKKLKTQDH PQVPPPPGYI  120
HVRARRGQAT DRHSLAERVR RQKISQRMKV LQTLVPGCHK VTGKALMLDE IINYVQSLQS  180
QIELLSMELA SVHPIRYDFG MDNPEVFIGT PVTQVLNGSG MVSRSEQAEL AYNMASCNTF  240
QATGGGGGGG DSPILTAENG SFIPVDMNPS QLFLDYGNAS LQHLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.26e-46bHLH family protein