PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516429.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 263aa    MW: 29774.9 Da    PI: 8.4808
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.5e-08155202455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023516429.1 155 SHSLAERVRRGKINERLRCLKDIVPGC----YKTMGMAVMLDEIINYVQSLQ 202
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MADFPPHFQT FISPHSMEDP NLHLLPPPYS VPPNPPPNFT NFFPFSGDPF FPHQPPPQFP  60
PPNPPEPTSS FPLFPSQTAP PPPLSEFHDI KKRKSMDVSE SSSGISTPQL SEKGFNTKQN  120
SRKGKRLKRT EIEEEEKSRR EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLKDIVPG  180
CYKTMGMAVM LDEIINYVQS LQNQVEFLSM KLAAASSLYD FNLEVDAISK LQRAKAHEAK  240
EELERLMREG YGGIGCFHSN LPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.12e-59bHLH family protein