PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516404.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 276aa    MW: 29992.6 Da    PI: 8.4262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-10157204455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_023516404.1 157 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 204
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDLPLVNESS FSAANPSAYS LAAIWPFGGE QGGNALGLRM ASLSQNLGGF PESSTNRDGS  60
MEESTVTEQS GGGRKRKDVS SEDESSRMVS TSSANQLSNS NGKRMKVVAS RHEGGGIKAE  120
VEPSSADGKK LAEQSRKPEP PKDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV  180
PGCNKVIGKA LVLDEIINYV QSLQRQVELL SMKLEAVNSR MNLSSAIEVF TAKNMVNQPY  240
DAVGILYGSQ AARDYTQAAQ PEWLHMQIGG SFERTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.11e-90bHLH family protein