PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515754.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 345aa MW: 39154.7 Da PI: 6.4048 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.9e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl XP_023515754.1 14 KGLWSPEEDEKLFNYITSFGVGCWSSVPKLAGLERCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.6e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia +++ gRt++++k++w++ XP_023515754.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIATRLP-GRTDNEIKNFWNS 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MGRNSCCLKP KLRKGLWSPE EDEKLFNYIT SFGVGCWSSV PKLAGLERCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIATRLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPITHKPLE DNMEAMKDQK PRGEVPHLLQ VNVSNITISS EASILNDSNH YYKQTEDSSQ 180 HFVNKIEFDS LSSYLGGEYN NNSQFAAAEY QYNNTFYSNS SMGMPSYTSS EHGNMSRTDF 240 SENSGSGFSC FLMNEVKESS SNSSVMSNYS GYQNSGGFSW ESEKKLEKLL QFETNQMKNM 300 GLKGSSEEET KNIETQMNSA SFGSYPLMSM SENERGGSFG VFHQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 2e-81 | MYB family protein |