PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515621.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 329aa MW: 35463.4 Da PI: 9.7437 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 125 | 169 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++lG g+W+ I+r +++t+ q+ s+ qky XP_023515621.1 125 PWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKY 169 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MGRKCSHCGN IGHNSRTCTN FRPSITPNFN VGSGLIRLFG VHLDSSSSSS SSSSSSSSTT 60 SSSSAAAFAI KKSFSTDCLS SSSSSSSFST SRIQIDHNLE PSKPTNGYLS DGLLNGDQER 120 KKGVPWTEEE HRIFLIGLEK LGRGDWRGIS RNYVTTKTPT QVASHAQKYF LRQSTVNKKN 180 RRSSLFDMVG TAYDTTTTAL SQCLKISSNS QTHSNKNEMN IKKELNLPLL ESKITTTFAS 240 SQQLGSSMEV MNNNNQAFSS SSSSSIWLYG LIDSQLKSAS QTMICSSSSG AGGPDLELTL 300 AAPRASNLEY EQTKKASTGS LLVDPIRVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 9e-54 | MYB_related family protein |