PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515250.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 443aa MW: 49817.5 Da PI: 9.9595

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	129	170	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_023515250.1 129 SWTKEETDRLFDLCERFDLR-FVVIADRFPSTRTMEELKERYY 170 7*****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDAKDILGLP KNTLHIPQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFANSAR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEIVKYTDED 120 YEKYLNEPSW TKEETDRLFD LCERFDLRFV VIADRFPSTR TMEELKERYY RASRAILAAR 180 EPMPRESSGN TLAKDPYSVS QEIERKRALS MVLSQTKQQE RKDAEVLAEA KKITESRRDE 240 RVPEKSELPV TSNAVPGATE RAVVPGDSLP SVSNVQPPPP AAAPSTLVAD NASTLASLRM 300 LPVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKSVC AEHLELRKEI 360 LTLLNLQKQL QNKEAEGSSF REGPYNEAPG TPKDRSFIPD SMSSGGERSG KRDQKRKATG 420 RLSEAPSSPA QTKRPRKQKG SDL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDAKDILGLP KNTLHIPQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK  60
RPPSDEKITW QWLPFANSAR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEIVKYTDED  120
YEKYLNEPSW TKEETDRLFD LCERFDLRFV VIADRFPSTR TMEELKERYY RASRAILAAR  180
EPMPRESSGN TLAKDPYSVS QEIERKRALS MVLSQTKQQE RKDAEVLAEA KKITESRRDE  240
RVPEKSELPV TSNAVPGATE RAVVPGDSLP SVSNVQPPPP AAAPSTLVAD NASTLASLRM  300
LPVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKSVC AEHLELRKEI  360
LTLLNLQKQL QNKEAEGSSF REGPYNEAPG TPKDRSFIPD SMSSGGERSG KRDQKRKATG  420
RLSEAPSSPA QTKRPRKQKG SDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	32	KKPRAQKDAQRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein