PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515132.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB
Protein Properties Length: 257aa    MW: 29608.9 Da    PI: 5.1891
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-17552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l ++v+ +G g+W+t ar  g++R++k+c++rw++yl
   XP_023515132.1  5 KGPWTAEEDSILFNYVNSHGEGRWNTAARSAGLKRSGKSCRLRWLNYL 52
                     79********************************************97 PP
2Myb_DNA-binding51.42.6e-1658101146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l++d++ qlG++ W++Iar+++ gRt++++k++w++
   XP_023515132.1  58 RGNITLQEQLLILDLHFQLGNR-WSKIARYLP-GRTDNEIKNYWRT 101
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDVRKGPWTA EEDSILFNYV NSHGEGRWNT AARSAGLKRS GKSCRLRWLN YLRPSVKRGN  60
ITLQEQLLIL DLHFQLGNRW SKIARYLPGR TDNEIKNYWR TRVQKQARQL KYDVNSKEFR  120
DTMRYVWMPR LLERIQASND SVSAIAIAID SDVVQPPQSH LDPTHSSPSK SSWVNSHVAS  180
TTSISNSISD EVQLQVSPVS NVVENDTSEK DEMVVLTDQG YDGDTMNELI GWEESLENGL  240
WNEEDMWFLQ QQFSDDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.18e-82MYB family protein