PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514698.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 357aa    MW: 39223.9 Da    PI: 7.4394
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-12114158347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_023514698.1 114 PWTEEEHRLFLFGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 158
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RGGRVGSGTL SSGGCGGGVK LFGVRLTDGS FIKKSASMGN  60
LSAHYHSSSS AAASPNPDSP NSDAVHDTDG FLSDDPSHAS CSANRGAERK KGVPWTEEEH  120
RLFLFGLQKL GKGDWRGISR NFVITRTPTQ VASHAQKYFI RLSNATRRKR RSSLFDMVPE  180
TETDLVRAPE DEVLHGYQAK ETENTGSQPS LNLSLNSEFH IMETTVEENG KELDAPKMEV  240
AGFPPMIPGY ISAYVPVPFS IWAPSTVPME EEKGVEMCHH EVLKPIPVVP KEPVNVNELV  300
GMSQLTLREH EREHKEPSPL TLKLISEPSR RLSAFHPNAR VSRSELNKDD NDTNKAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-69MYB_related family protein