PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514649.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family FAR1
Protein Properties Length: 209aa    MW: 23913.2 Da    PI: 8.1225
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.62.8e-2543132190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY eYA+++GF vr+ + + s  +g++  r++ C+k+g++ +++    + +++r+++r gCka++ vk+ek+gkw v++++++HnH+l+
  XP_023514649.1  43 KFYVEYARQMGFVVRIMQRRCSGIDGRTLARRLGCNKQGFAPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRIVKDHNHPLV 132
                     6******************************************99999****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MNLDDESGRA HDSIEINGDA AEGNLILEPY VGMEFDSEDA ARKFYVEYAR QMGFVVRIMQ  60
RRCSGIDGRT LARRLGCNKQ GFAPNRRGIY GSDKKPRPSS REGCKATILV KMEKSGKWIV  120
SRIVKDHNHP LVVCSNGFSC SGDKDKKIEE LKMELEHQEQ RCVAYREKLF DFISTVEEQT  180
EELSSKIQMI IGNVRQVESG MQKHYPFRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.17e-67FAR1 family protein