PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514537.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 314aa    MW: 34894 Da    PI: 7.8125
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.4e-14249294655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er+RR ri +++ +L+el P      +k  sKae+Le+AveYIk Lq
  XP_023514537.1 249 SIAERNRRTRISDRMKKLQELFPDM----DKQTSKAEMLELAVEYIKGLQ 294
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEDWVLLIIW VSSDFIFLGF GISSNSLEAY PDFMDCDSTN IHSAGGLMRY WSAPTSVFAN  60
LLDGTEGLLP SNNGGGGSGA EDYRVIRSTS PVVVNRSCSM VNCGGGDQIG NSLGVMNLNN  120
SMQLDLGARN SGNLFRQSSS PAGIFSHFTA ENGNTTRQYD DDFLNSSWHN SATKDLKRGR  180
DNNGRTFPTS IVLETQKAGY ENNNSGLAHH LSFPITFNND PVEKFFRFQE HPIRHQIRAK  240
RGCATHPRSI AERNRRTRIS DRMKKLQELF PDMDKQTSKA EMLELAVEYI KGLQRQVKTL  300
TDTNAKCACL CSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-41bHLH family protein