PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514102.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 686aa MW: 75408.4 Da PI: 6.2077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00053	518	555	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_023514102.1 518 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 555 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDL PESKFYSKTI 60 EKFHDGCYSH DALGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNFSSTLEYC 120 DGWQTQFSAG IKTIVVAAVV PHGVLQLGSL DKVTEDGNLV ARIRNVFLTL QESSAGHIKP 180 MHSCESSGYV ADIPSRSLAT EKNEVEMVSK DVGIELSGSG GIKSLEIKPD AINVDSFKSQ 240 VRLLHDRICG GEPSGCKDIA VGLKQKINVG SQNSEMDMVH LSGPAEKIIT DEAYFPMNPH 300 ASSVCGLKHQ GMCSQTNPSE MYLQNDVEAS ETINVYPSNS SLKFPAGYEL HEVLGPAFLK 360 DALYLDWKTQ YIFGGKAFEL SEGTNGSHLT SDSPTEHLLE AVVADVCHSG SDVKSDTSLC 420 KSGQSLLTTE RIPEPSTNVT SACSEGYTMG QSQTSFIGEE MQNSLSSSGV CGVMSTKGFS 480 STYSGTGSEH LEQFSEPAKN SKRRARPGES CRPRPRDRQL IQDRIKELRE LVPNGAKCSI 540 DSLLERTIKH MLFLQGITKH ADKLNKCANM KLHQKKNGML GSSSTDQGSS WAVEVGGQLK 600 VCSIIVENLN KNGQILVEML CEECSHFLEI AEAIRSLGLI ILKGITEAHG DKTWICFVVE 660 GENNRSIHRM DILWSLVQIL QRSNTM

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDL PESKFYSKTI  60
EKFHDGCYSH DALGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNFSSTLEYC  120
DGWQTQFSAG IKTIVVAAVV PHGVLQLGSL DKVTEDGNLV ARIRNVFLTL QESSAGHIKP  180
MHSCESSGYV ADIPSRSLAT EKNEVEMVSK DVGIELSGSG GIKSLEIKPD AINVDSFKSQ  240
VRLLHDRICG GEPSGCKDIA VGLKQKINVG SQNSEMDMVH LSGPAEKIIT DEAYFPMNPH  300
ASSVCGLKHQ GMCSQTNPSE MYLQNDVEAS ETINVYPSNS SLKFPAGYEL HEVLGPAFLK  360
DALYLDWKTQ YIFGGKAFEL SEGTNGSHLT SDSPTEHLLE AVVADVCHSG SDVKSDTSLC  420
KSGQSLLTTE RIPEPSTNVT SACSEGYTMG QSQTSFIGEE MQNSLSSSGV CGVMSTKGFS  480
STYSGTGSEH LEQFSEPAKN SKRRARPGES CRPRPRDRQL IQDRIKELRE LVPNGAKCSI  540
DSLLERTIKH MLFLQGITKH ADKLNKCANM KLHQKKNGML GSSSTDQGSS WAVEVGGQLK  600
VCSIIVENLN KNGQILVEML CEECSHFLEI AEAIRSLGLI ILKGITEAHG DKTWICFVVE  660
GENNRSIHRM DILWSLVQIL QRSNTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.2	1e-127	bHLH family protein