PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 26856.8 Da PI: 10.4683 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.3 | 1.1e-07 | 96 | 141 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er RR++ +++++eL ++lP K++K +i+++A + I +L XP_023513950.1 96 RHMLNERMRREKHRQSYSELHSMLPIK-----VKNDKNSIVQMAARTIEEL 141 58889*********************8.....7**************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDDGFPVEFW HTDLYWLDAP IPVSDPAPGQ ISAFVPYLPQ PAIGSRQKNN PITATTITAT 60 YSENVHKRVI EYWRKRWQEK KKPAEMGDLE RERSHRHMLN ERMRREKHRQ SYSELHSMLP 120 IKVKNDKNSI VQMAARTIEE LKASEGMLKK RNIELEMALS AKKRKQEKGT TPIRVAVANP 180 SSGINSMLGV LNLLKTVGVN AKAIHATFLD SQFSTHIAID SHVRSPDSFK FVSNR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 165 | KKRNIELEMALSAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-36 | bHLH family protein |