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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 289aa MW: 32148.9 Da PI: 5.8639 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.4 | 7.1e-29 | 111 | 171 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqK++ gs+fpr+Y+rC+++ gC+++k+v+r ++dp++ eitY+g+H+++ XP_023513678.1 111 DDGFSWRKYGQKDILGSKFPRGYFRCSHRfaqGCSATKQVQRLDNDPSMYEITYRGKHTCN 171 8***************************9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MEFVNLIQEL NQGRNLAHQL RDHLHPSLSS SSSSSSSPSS NGILLIDQIL RSYENALSVL 60 AGGSGGGGDE EIPPAIAAVK HRDVSKKRKV MAKWSELVKV PSVSAIGALP DDGFSWRKYG 120 QKDILGSKFP RGYFRCSHRF AQGCSATKQV QRLDNDPSMY EITYRGKHTC NKSLHSNTPK 180 QEQTPQLQQH PMPMPPKQEQ EEPLQQQDVP LYLTVSSDNV DDSLRRPFCP RSPLFRSEVE 240 DDQSPFRGSE LEGLEFWCIG DGDLVSGPSS FTNISMGDLE EYCSLESFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 6e-35 | WRKY family protein |