PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513656.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 524aa MW: 58649.9 Da PI: 5.9568

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	8.6e-10	353	390	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ +LA+++gLt +qV +WF N R + XP_023513656.1 353 FEHflHPYPKDTEKLKLARQTGLTRNQVANWFINARVR 390 664459******************************88 PP
2	BELL	91.2	1e-29	217	288	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+l++k +kLlsll eVd+rYkqy++q q ++ssF+ vag g+a+ Yt+lA +iS hFr L+dai qi XP_023513656.1 217 ERQDLKNKNSKLLSLLGEVDRRYKQYYQQEQFLASSFDLVAGRGAAEFYTALAHWTISCHFRRLRDAINAQI 288 799******************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MTYFPSLSNP RESTLGDQKL GSSCQEQLLC SANLMMFMNH QDPSCGDYSE IFSGVSSNYV 60 ESVGDRSNGE MGFIPPVVGI LDHSNFQCQG VSLSLSTHLP SVVSLPSFPS QYQTRALPSS 120 FICAPPSIFE QRSNPKLCMS DAKNGMYMSV AAANLVSNSI YVEAAQQLLD EVVSIGEALK 180 ELKSKKLKGS NDLTGEMCSD ATDLLLANSS GDLSPTERQD LKNKNSKLLS LLGEVDRRYK 240 QYYQQEQFLA SSFDLVAGRG AAEFYTALAH WTISCHFRRL RDAINAQIKT TRRTLGEQDA 300 SHSGQEGIPR LRFVDQQLRQ QRTLQQLGVT SHSWRPQRGL PESSVSILRA WLFEHFLHPY 360 PKDTEKLKLA RQTGLTRNQV ANWFINARVR LWKPMVEEMY KEEFGDTNMD IKSSPENASK 420 PSWNNNSLFS EDRSGDKLHD NTKSAASNNE RVLYCPCSTD DMIKPSNFLV DGDVSLALEL 480 KHCEGEEFGM FGSSNNRMVG SIELETQDFQ CRLPSSNMLH DFVV

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MTYFPSLSNP RESTLGDQKL GSSCQEQLLC SANLMMFMNH QDPSCGDYSE IFSGVSSNYV  60
ESVGDRSNGE MGFIPPVVGI LDHSNFQCQG VSLSLSTHLP SVVSLPSFPS QYQTRALPSS  120
FICAPPSIFE QRSNPKLCMS DAKNGMYMSV AAANLVSNSI YVEAAQQLLD EVVSIGEALK  180
ELKSKKLKGS NDLTGEMCSD ATDLLLANSS GDLSPTERQD LKNKNSKLLS LLGEVDRRYK  240
QYYQQEQFLA SSFDLVAGRG AAEFYTALAH WTISCHFRRL RDAINAQIKT TRRTLGEQDA  300
SHSGQEGIPR LRFVDQQLRQ QRTLQQLGVT SHSWRPQRGL PESSVSILRA WLFEHFLHPY  360
PKDTEKLKLA RQTGLTRNQV ANWFINARVR LWKPMVEEMY KEEFGDTNMD IKSSPENASK  420
PSWNNNSLFS EDRSGDKLHD NTKSAASNNE RVLYCPCSTD DMIKPSNFLV DGDVSLALEL  480
KHCEGEEFGM FGSSNNRMVG SIELETQDFQ CRLPSSNMLH DFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	6e-85	TALE family protein