PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 296aa MW: 33145.1 Da PI: 6.869 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + G g+W+ +ar g+ R++k+c++rw +yl XP_023513290.1 16 KGLWSPEEDDKLMTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.6e-16 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_023513290.1 69 RGAFSPQEERLIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 112 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MRKPDPAAAR TTKLRKGLWS PEEDDKLMTY MLNNGQGCWS DVARNAGLQR CGKSCRLRWI 60 NYLHPDLKRG AFSPQEERLI IHLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN 120 LSSTPSPNTS SAASPSDNSK SIPFGGLLST QDYQQQQQGL IDYPIYASDP SPSIIALDPF 180 PAFTADAEPG FFLEHDSFFN NLPVLQRVNT TTVVTTATTA ATTLAKEANH GNYLISNINC 240 LANHNNNSNN NPKMENINGE VGTNFVHEEF SIGEWELEDL MKDVPSCFPY LNFQVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 8e-71 | MYB family protein |