PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513207.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 230aa MW: 26255.3 Da PI: 6.5999

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.3e-09	98	145	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k K+ +L + ++Y++sLq XP_023513207.1 98 SHSLAERVRREKISKRMKYLQNLVPGC----NKITGKVGMLDEIINYVQSLQ 145 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MFAAETTVSE TQTGRVKWRR TDGDCRSLCS VSTPASRVEH FEDLIAAGDW PELRSNRSGS 60 RNQKRKTETS KQSSKDCKEV QKLDYVHVRA RRGQATDSHS LAERVRREKI SKRMKYLQNL 120 VPGCNKITGK VGMLDEIINY VQSLQQQVEF LSMNLAALNH EFDLVNGHDL FVEQHFEHSS 180 TWGGDLQSLH GMSFEEEGPP LLSPSSFLTQ QCSYIEDENE TFLDQKHVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18300.1	6e-51	bHLH family protein