PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513206.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 274aa MW: 30956.3 Da PI: 5.6037

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.2	1.7e-09	98	145	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k K+ +L + ++Y++sLq XP_023513206.1 98 SHSLAERVRREKISKRMKYLQNLVPGC----NKITGKVGMLDEIINYVQSLQ 145 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MFAAETTVSE TQTGRVKWRR TDGDCRSLCS VSTPASRVEH FEDLIAAGDW PELRSNRSGS 60 RNQKRKTETS KQSSKDCKEV QKLDYVHVRA RRGQATDSHS LAERVRREKI SKRMKYLQNL 120 VPGCNKITGK VGMLDEIINY VQSLQQQVEF LSMNLAALNH EFDLVNGHDL FVEQVFPTIE 180 ISPETANYSS NFNELEIGSS SSSLTVPETS FFNSSSITHF EHSSTWGGDL QSLHGMSFEE 240 EGPPLLSPSS FLTQQCSYIE DENETFLDQK HVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18300.1	8e-51	bHLH family protein