PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513135.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34665 Da PI: 6.7899 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.8 | 6e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_023513135.1 14 KGPWTPEEDRILVDYIEKHGHGSWRALPNLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E ++++ +++ lG++ W+ Ia++++ gRt++++k++w+++l XP_023513135.1 67 RGNFSDQEKQIIISLHASLGNK-WSIIASHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MSRASMLDEN GLKKGPWTPE EDRILVDYIE KHGHGSWRAL PNLAGLNRCG KSCRLRWTNY 60 LRPDIKRGNF SDQEKQIIIS LHASLGNKWS IIASHLPGRT DNEIKNFWNT HLKKKLLQMG 120 IDPVTHMPTP FDHHTNTFSN LHHLLSLSTA PWDSSSRLHT QATQLAKAHL LQNVLQILSS 180 PSSLAISNNL FNTQQITDLL TYNHPIGSSF QTFPSNIQPL QEPLSCDDYA TTTPTLALEN 240 DCNRAESFYD MSQCPHSLPD LIPASPECSK IPTAIENNWV DIMDDETSNS YWKHAINQTP 300 PPPWSVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02940.1 | 1e-84 | MYB family protein |