PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512593.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 249aa    MW: 27249 Da    PI: 7.9226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.7e-1261107354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  +  Lr+l+P       kK++Ka+ L +++ ++k L
  XP_023512593.1  61 KNHSEAERRRRARINGHLGSLRSLVPGG-----KKMDKATLLAEVISHLKVL 107
                     58************************87.....8**************9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MGQFSRICSY DGVCANSAVI RNGSASTSSL VLDSERDELI EAPLKLESKG VPAERSAAAL  60
KNHSEAERRR RARINGHLGS LRSLVPGGKK MDKATLLAEV ISHLKVLKRA AAEVSDAHII  120
PKEVDEITVE HQEDGFDGVS YSIRASLCCD YKPGLLPDLR RALHALDLII KRAEIGTLNG  180
RMQNVLVLTS CKDGDIETTE LQTSVHQAIK SVLNNFSDPQ EFSFMAFPNK RRRISLLGSS  240
SSSSMGDFW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230234KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-33bHLH family protein