PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512582.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 679aa MW: 74321.4 Da PI: 6.075

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	418	455	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + XP_023512582.1 418 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 455 664559******************************88 PP
2	BELL	124.5	4.2e-40	280	351	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k +kLl +l+eVd+rY+qy++q+q+v+ssF+++ag+g++kpYt+lAl++iSrhFrcL+daia+q+ XP_023512582.1 280 EKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQV 351 6899*****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MATYYSSSNN ERDTTPILYS RGALLGSYEE TAVLPRNMMM NANSGTFMDS LPSQAQNGCS 60 SITPVGAVGT AQQQQEFLTN LGGSRISDHD FNTWREDRSE MLGTNSMCVS TNVVRGGQNL 120 QGQGLSLTLS TQIPSGIQMA SIPYRDSDVG LASFLRPNPT SSGEDGCRNG ASRDEQLRNG 180 ENLAKGELSP YSMSSIARTM PNSKYLKAAQ QLLDEVVNVR KALKRPNNER DPSSHERETG 240 TAENGDAGTK NDTSMQTASG VSSKPQETGS NSTCELSHAE KQDLQNKLTK LLYMLDEVDR 300 RYNQYYHQMQ IVVSSFDVIA GCGASKPYTA LALQTISRHF RCLRDAIAGQ VRATRKSLGE 360 HENSGNDKGV GITRLRYVDQ QLRQQRALQQ LGMIQQHAWR PQRGLPENSV SILRAWLFEH 420 FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEIG SVDMDSISSS 480 ENASKATKGD NKTFEDDKEE DLQQSASSTA TERCSTGDIV DLKSDQVSNL ANSGSNRLAS 540 FQNGAHVEAE NELIKPNEEL RSNVNNSNFF PDAIVQSQGE SDRFMAAAAA AYHMSELGRF 600 GTVGGVSLTL GLQHCEGGGG IPMPAGTHHG FAAMRGDDMY NAAAAASSLG ETVHFECVNA 660 AGNPQLRFGP SHLYHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MATYYSSSNN ERDTTPILYS RGALLGSYEE TAVLPRNMMM NANSGTFMDS LPSQAQNGCS  60
SITPVGAVGT AQQQQEFLTN LGGSRISDHD FNTWREDRSE MLGTNSMCVS TNVVRGGQNL  120
QGQGLSLTLS TQIPSGIQMA SIPYRDSDVG LASFLRPNPT SSGEDGCRNG ASRDEQLRNG  180
ENLAKGELSP YSMSSIARTM PNSKYLKAAQ QLLDEVVNVR KALKRPNNER DPSSHERETG  240
TAENGDAGTK NDTSMQTASG VSSKPQETGS NSTCELSHAE KQDLQNKLTK LLYMLDEVDR  300
RYNQYYHQMQ IVVSSFDVIA GCGASKPYTA LALQTISRHF RCLRDAIAGQ VRATRKSLGE  360
HENSGNDKGV GITRLRYVDQ QLRQQRALQQ LGMIQQHAWR PQRGLPENSV SILRAWLFEH  420
FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEIG SVDMDSISSS  480
ENASKATKGD NKTFEDDKEE DLQQSASSTA TERCSTGDIV DLKSDQVSNL ANSGSNRLAS  540
FQNGAHVEAE NELIKPNEEL RSNVNNSNFF PDAIVQSQGE SDRFMAAAAA AYHMSELGRF  600
GTVGGVSLTL GLQHCEGGGG IPMPAGTHHG FAAMRGDDMY NAAAAASSLG ETVHFECVNA  660
AGNPQLRFGP SHLYHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-117	TALE family protein