PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023512380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 25018.7 Da PI: 6.7913 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.9 | 1.2e-10 | 64 | 113 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ rE+ RRd++N++f eL +l + + +K +K+ iL A++ + +Lq XP_023512380.1 64 TSKACREKLRRDKLNERFLELSAVLEPG---KLPKTDKVVILSDAIRMVTDLQ 113 67889**********************9...9****************99998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MEDLPVVGAP FSPPQSVSFS WSNPSINFPS NKHSLEVDCS YEDLDSLKEV GRKRLKAETS 60 SASTSKACRE KLRRDKLNER FLELSAVLEP GKLPKTDKVV ILSDAIRMVT DLQCEIEKLK 120 ESEDDLKEKI KELKVEKNEL RDEKQRLRAE KEKLELQIKA VNARAAADIQ HPPPTLSAAF 180 TAQGQAAGNK LMPFIGYPGI AMWQFLPPAT VDTSQDHVLR PPVA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 51 | 57 | GRKRLKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-59 | bHLH family protein |