PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023512219.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 556aa MW: 63386 Da PI: 6.2737 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.1 | 2.6e-10 | 505 | 553 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_023512219.1 505 KKWSLLEEDTLRTAVQRFGKGNWKLILNSYRdifDERTEVDLKDKWRNM 553 58********************************99***********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 556 aa Download sequence |
MNEDICRWIT EFVLRSSMDD HLLKRVLAVI PLSDKDFRLK KTVLLRAIES EISEAVITEK 60 LLEIFEMIEQ LEKAEGLQIM ESMKAAYCAV AVECTVKYLL VEGVYKHGRY FDAVRRIWRG 120 RVTKTELVSN EFKAWKDEVE ASLCDTNIRK KLVHMNTRYD ALKLIGDYLG ESWAAMGPSF 180 LQLSASLVDK KMRKEMHSIQ LERETNNLAI ESVDAGGSGG IELPPQREDC VRTEWQGSGR 240 VLSQPESRRT DLLYSHQDLG TNDGSKQSAI DAMNTERVQE LATETAEGQE SAEKEVAVLQ 300 NASSCREILK TSVLPRGKFL AFHRRVRGGV KISHLEDLEK ENEDESSSER YNCLETPEVN 360 RVREALKTSS LELQAMVKDP LPDALRIAES VAHDLAEKNK TCENSLEDRN DAGVDNPTIN 420 KEAVPLQPMS ANLKDPGHGH KTVFPRPSIM ERNSTACTYE WNDSIDDLPE GSPASRLHLH 480 SPKRKAISPL KKYEETKAVG RRRCKKWSLL EEDTLRTAVQ RFGKGNWKLI LNSYRDIFDE 540 RTEVDLKDKW RNMTRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15720.1 | 1e-20 | MYB_related family protein |