PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023511943.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 734aa MW: 82820.2 Da PI: 5.0021 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 352.5 | 6.6e-108 | 357 | 731 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL+ cA+avss+d + a +lL++++++++ +gd qR+a++f +AL+ar+++++++ + ++s+ + ++ l+a+++ +P+ k+s XP_023511943.1 357 LRNLLILCAQAVSSDDRRIAYELLKQIRQHSTTTGDGSQRMAHFFSNALEARMVGTGTGSRIYYDSLAQSNISAADMLKAYQAHLSSCPFKKLSL 451 6899**************************************************94444333344455554559********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + ++Il+ +e+++ +H+iDf+i +G+ Wp L+q La p+gpp+lRiTg++ p +g +e+++e g+rLak++e+++vpf++++++++++e+ XP_023511943.1 452 FFMIKMILKVAENAKSLHVIDFGICYGFLWPMLIQFLALLPDGPPKLRITGIDYPLPGfrPEEKIQESGRRLAKYCERFKVPFQYQAIASNNWET 546 *******************************************************99999****************************999**** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+L+++++++l+Vn+ ++ +llde+v+ +s+rd vL+l+++++P+++v++ + ++n++ F +rf eal ++sal+d+l+++lpr+seer+ XP_023511943.1 547 IQVEDLKLDSNDVLVVNCFYRFNSLLDETVEESSPRDIVLRLIRKMNPNIFVHSVVNGSYNAPFFITRFREALFHFSALYDALDVNLPRDSEERM 641 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 ++Ere+lgr+i+nvvaceg +r+er e +++W+ r ++aGFk++pl+++++++ ++ l ++ + + ++e++g++++gWk+r +++ ++W XP_023511943.1 642 MLEREFLGRQIMNVVACEGVQRVERPEPYKQWQVRCMRAGFKQLPLDKEIMCKFRTKLTSHYHKDFVLDEDEGWMLQGWKGRIVYASCCW 731 **************************************************************888************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 734 aa Download sequence |
MDPNLNAFTD RMADYQTSLT QSYDDGFRLN DFEFNDPSPD FVPFVDNSLF PYQPNPNKFP 60 GAVDLNLGGV ASGQSPDGDS SSDELDFRES VLKYISQMLM EENLEEKPCM FYDPLGLENT 120 EKSFYDALGK NYPPPSPNQP PLDCESSEDV CRGSDSDRTS TAVSAANSNS PDPQWVVDPG 180 ESKSSILTRS IPSSSYQSSL TINSHELVTE LLAQNIFSDS TSILQYQKGL EEASKFLPVG 240 NQLNIDLGSG KFTGVASKVT DTTENSPNGS KRRKNRGPEA IDLDSEEGRK NKHATIYGDE 300 EELTDMFDKV LLHDCGSEAS ANGGCEKLQN NRQVHGGSNA GKAREKKQDK RNNSVDLRNL 360 LILCAQAVSS DDRRIAYELL KQIRQHSTTT GDGSQRMAHF FSNALEARMV GTGTGSRIYY 420 DSLAQSNISA ADMLKAYQAH LSSCPFKKLS LFFMIKMILK VAENAKSLHV IDFGICYGFL 480 WPMLIQFLAL LPDGPPKLRI TGIDYPLPGF RPEEKIQESG RRLAKYCERF KVPFQYQAIA 540 SNNWETIQVE DLKLDSNDVL VVNCFYRFNS LLDETVEESS PRDIVLRLIR KMNPNIFVHS 600 VVNGSYNAPF FITRFREALF HFSALYDALD VNLPRDSEER MMLEREFLGR QIMNVVACEG 660 VQRVERPEPY KQWQVRCMRA GFKQLPLDKE IMCKFRTKLT SHYHKDFVLD EDEGWMLQGW 720 KGRIVYASCC WVPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |