PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511850.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 353aa MW: 40438.4 Da PI: 5.0633

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.5e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k++g+++el e+i+e+d+yk+ePw+Lp k + + + ewyf+s+rd+ky++g+r+nrat+ gyWkatgkd+ v XP_023511850.1 6 LPPGFRFHPTDEELVAYYLDRKINGRSIEL-EIIPEIDLYKCEPWELPdKsLLPSIDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRVVQ 99 79**************************.99**********95444455678******************************999 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+ykgrap+g +t+Wvmheyrl XP_023511850.1 100 S-QKRVVGMKKTLVYYKGRAPHGIRTNWVMHEYRL 133 9.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSLLPSI 60 DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRVVQS QKRVVGMKKT LVYYKGRAPH 120 GIRTNWVMHE YRLLHSQHAT AASCSSTKDS YALCRVFKKT TQIPKPVREK ASGVDVEAPV 180 WQMGDEQDMQ VDESGGAESS RGGIESNEDG DSFDHLLHEY NPKIFSSENS SSDLTQGNVA 240 DDMPAPVVSD NEANSAANNL YPIHIECPSN FIQIPSNLHY QHPYYPPLEL EDFPQLNIMG 300 ETKTWMKVEC MDEYMKFEKF RESMNGSLEE ILSACNVPMQ EDHNLQQYSS LLQ

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSLLPSI  60
DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRVVQS QKRVVGMKKT LVYYKGRAPH  120
GIRTNWVMHE YRLLHSQHAT AASCSSTKDS YALCRVFKKT TQIPKPVREK ASGVDVEAPV  180
WQMGDEQDMQ VDESGGAESS RGGIESNEDG DSFDHLLHEY NPKIFSSENS SSDLTQGNVA  240
DDMPAPVVSD NEANSAANNL YPIHIECPSN FIQIPSNLHY QHPYYPPLEL EDFPQLNIMG  300
ETKTWMKVEC MDEYMKFEKF RESMNGSLEE ILSACNVPMQ EDHNLQQYSS LLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-105	NAC family protein