PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511763.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family YABBY
Protein Properties Length: 192aa    MW: 21790.2 Da    PI: 8.3299
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY173.31.5e-5331602165
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkeelleelkveeenlksnvekeesasts 95 
                     ++f+ +e++CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn++ a+ + l   s l++    +l +e   e ++ k  ++  +s+  +
  XP_023511763.1   3 HLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMMRATLVpLHFLSSLSR----NLPKEGCREMSSGKLFDSFIRSNL-K 92 
                     78999******************************************998766331233333333....333332222222222222222222.2 PP

           YABBY  96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165
                      s ++    e+  +p +pp v++PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+
  XP_023511763.1  93 FSEYE---VEEGLIPVTPPsVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 160
                     22222...233345555555*************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MNHLFELPEK ICYVQCGICT TILLVSVPCS SLSMEVTVTC GHCSSLLSVN MMRATLVPLH  60
FLSSLSRNLP KEGCREMSSG KLFDSFIRSN LKFSEYEVEE GLIPVTPPSV NKPPEKRQRV  120
PSAYNCFIKD EIRRLKAENP QMTHKEAFRT AAKNWANFPP TIQQKEDPQN TQIPEFQVEK  180
NGKCFPRHSV LT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.12e-55YABBY family protein