PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511608.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 307aa    MW: 33934.3 Da    PI: 4.7257
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-112312711055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023511608.1 231 RRRRERINERLKILQTLVPNG-----TKVDISTMLEEAVQYVKFLQ 271
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAHLTAPIAE GDDQWSSLNG AFTADEEEAT FVAQLFAPPD PFMANLHDLH QPPCEPASCS  60
SFYRVSQESS EFSGGSYCSQ LLFSGSESND HYYYCNPMDN HDFSLGELGS NNNGGFHLED  120
HEDSMNIEAV VGEEGGNPLD INAKKRSRGF GDLQKRRNEK SKKTQKLITE EDGNNAAHNR  180
QSTSSYCSED ESNASLELNG GVNNSGPSPN RPTKSRASRG SATDPQSLYA RRRRERINER  240
LKILQTLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSD DLWMYAPIAY NGMDIGLNPT  300
PNTPKVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143149AKKRSRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-46bHLH family protein