PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511534.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 187aa    MW: 22061.1 Da    PI: 9.5193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.61.5e-2091431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 
                     lp+G+rF+Ptd +l+ +yL+ k++g++    +++ ++d+y ++ePw++  ++ + + +++yfF+k +++++++     + nr++   +g+W+   
  XP_023511534.1   9 LPVGVRFRPTDPQLL-QYLHWKIHGQPYFK-RAVLDCDLYgEMEPWEIWLRFGGiDGEDLYFFTKLKRSTNNSGrlsaHINRKVGlaNGTWSGEN 101
                     79*************.9**********655.789999998468*****854443377899******9999986623223455433559******* PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++++  +++ +g  k + + + + p+ ++ +W+mhey+l
  XP_023511534.1 102 SASPIFATktDKTIIGYCKRFRYENVQLPE-HHGEWIMHEYSL 143
                     ******98666677*********9999998.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MGSHDRSLLP VGVRFRPTDP QLLQYLHWKI HGQPYFKRAV LDCDLYGEME PWEIWLRFGG  60
IDGEDLYFFT KLKRSTNNSG RLSAHINRKV GLANGTWSGE NSASPIFATK TDKTIIGYCK  120
RFRYENVQLP EHHGEWIMHE YSLHQDSIQQ AVDSDYVLCR FKKNERLKRK LQKDLEEQQL  180
SKRRMTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.25e-15NAC family protein