PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511533.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 208aa    MW: 24381.8 Da    PI: 8.0069
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.41.2e-1891431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 
                     lp+G++F+Ptd++l+ +yL+ k+++ +     ++ ++d+y ++ePw++  ++ + + + +yfF+k ++ +++++    + nr++   +g+W+   
  XP_023511533.1   9 LPVGVKFKPTDQQLL-QYLNFKIHALPYFK-GAVLDCDLYgEIEPWEIWLRFGGiNGQYLYFFTKLKRLTNNSEhlwaHINRKIGlaNGTWSGEN 101
                     799************.9*********9655.689999999468*****854444266788*****99988876656666677544449******* PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++++  +++ +g  k + + + + p+ ++ +W+mhey+l
  XP_023511533.1 102 SASPIFATktDKQIIGYCKCFRYENVQLPE-HHGEWFMHEYSL 143
                     *****998777888*********9999998.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDSRNRSLLP VGVKFKPTDQ QLLQYLNFKI HALPYFKGAV LDCDLYGEIE PWEIWLRFGG  60
INGQYLYFFT KLKRLTNNSE HLWAHINRKI GLANGTWSGE NSASPIFATK TDKQIIGYCK  120
CFRYENVQLP EHHGEWFMHE YSLHQDSIHQ VVDSDYVLCR LSKNERVKRK LLKNLELQQH  180
SKKRIMAPGS TIEQDTMSDV TIDQDFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-12NAC family protein