PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007723.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 708aa MW: 77284.5 Da PI: 6.511

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007723.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.6	9.7e-32	306	362	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+Hnh XP_023007723.1 306 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGTHNHV 362 7**************************************.*************6 PP
2	WRKY	103.2	1.4e-32	501	559	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ XP_023007723.1 501 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 559 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MGRTDDNVAI IEDWVPPSPS PRTFFSAMQI LEEDVAGSRP TMDITSTDKP EKIFLGSQEH 60 TVSKNIIARG GIPGVNSGDR STEFGTVSEQ KFRGGLVERI AARAGFNAPR LNTENIRSTE 120 EVKSPYLTIP PGLSPTTLLD SPVFLSNSLA QQSPTTGKFP FVANVSYRSS TMMLEANNRG 180 NDNPFDDNGS AFAFRPSVES GSSFFHGAAS KVISLPQSCP RIEVPGLPSE NSYQPENRIN 240 HHPQMGLSTS CTERDDGGKN LLNDQRPFDS VCGGEHSSPL DEQPDEGEQR GTGDSMASGG 300 CGAPSEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCQVKK KVERSHEGHI TEIIYKGTHN 360 HVKPSPNRRA SDSHINMQLD IPVQAGQQNA EVPLWEDSQK GTPDWMHSNL EVSSSASLGP 420 EYGNHIETAE AIDASSTFSN DEDEDDRGTH GSITMGYEGE GDESESKKRK LDAYVTEMSG 480 ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCTVRKHVER 540 ASHDLKSVIT TYEGKHNHDV PAARNSSHIS SCTSSPVTGQ NSTATHAHRP GPPQPQNNMP 600 RVGRPAFGLA GRQPMGTAHA HGFGFGMNQP GLRNLNLTMT MASAGQAKLP VIPMHPYLAQ 660 AHNVHEMGFL LPKGEPNLEP TSDLGLNFSN GSTVYQQIMS RLPLGPEM

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MGRTDDNVAI IEDWVPPSPS PRTFFSAMQI LEEDVAGSRP TMDITSTDKP EKIFLGSQEH  60
TVSKNIIARG GIPGVNSGDR STEFGTVSEQ KFRGGLVERI AARAGFNAPR LNTENIRSTE  120
EVKSPYLTIP PGLSPTTLLD SPVFLSNSLA QQSPTTGKFP FVANVSYRSS TMMLEANNRG  180
NDNPFDDNGS AFAFRPSVES GSSFFHGAAS KVISLPQSCP RIEVPGLPSE NSYQPENRIN  240
HHPQMGLSTS CTERDDGGKN LLNDQRPFDS VCGGEHSSPL DEQPDEGEQR GTGDSMASGG  300
CGAPSEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCQVKK KVERSHEGHI TEIIYKGTHN  360
HVKPSPNRRA SDSHINMQLD IPVQAGQQNA EVPLWEDSQK GTPDWMHSNL EVSSSASLGP  420
EYGNHIETAE AIDASSTFSN DEDEDDRGTH GSITMGYEGE GDESESKKRK LDAYVTEMSG  480
ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNP GCTVRKHVER  540
ASHDLKSVIT TYEGKHNHDV PAARNSSHIS SCTSSPVTGQ NSTATHAHRP GPPQPQNNMP  600
RVGRPAFGLA GRQPMGTAHA HGFGFGMNQP GLRNLNLTMT MASAGQAKLP VIPMHPYLAQ  660
AHNVHEMGFL LPKGEPNLEP TSDLGLNFSN GSTVYQQIMS RLPLGPEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-180	WRKY family protein