PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007554.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 320aa    MW: 35761.1 Da    PI: 9.7673
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-15136180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_023007554.1 136 PWTEEEHKLFLMGLKKYGKGDWRNISRNVVVTRTPTQVASHAQKY 180
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MKWEMEILSP PSLVSTMSWS SGSSDSKSSR WTVAENKMFE NALAIYDTDT PDRWQKVASM  60
IPGKKVGDVI RQYKELEADV SSIEAGLVPI PGYDTSQFTL DWVSGHSYDG FKQSYGVVGK  120
RSSGRSADQE RKKGVPWTEE EHKLFLMGLK KYGKGDWRNI SRNVVVTRTP TQVASHAQKY  180
FIRQLSGGKD KRRASIHDIT TVNLNDTRSP SPVNKKSSLS PEHAAVLPRQ PNSSSSIPQN  240
TFKWDHHRYQ QQHDSGGATM VFNHSNRDIF MSSAVFGASS YGDVGLPEHH HLQKVAGNEA  300
FIGPQNMIFP MQAGHYFPLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-98MYB_related family protein