PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007492.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 404aa MW: 46266.6 Da PI: 8.3219

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.8e-15	39	119	9	95
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + l+ + l +pkkfa+++g + s +tl ++g +W ++l ++++++ ++++GW +F + + +++g +vF+++g+s f+ + XP_023007492.1 39 SILQDKKLKIPKKFAKKFGDD--LSDLVTLVVPNGYRWVLEL--KRHGRSLWFEDGWHDFIRHHCIQVGQLLVFRFEGNSVFN--FY 119 4455567*********988..7889***********..*******************************999994..44 PP
2	B3	63.1	4.3e-20	306	397	4	99
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 v+ +s+v + l +p kf e++ +g+ s +++l+ +sg++W+v++ + + ++ lt+GW +Fv +n+Lke D++vF+l + ++ l+v++f XP_023007492.1 306 VMRHSYVRRGFHLHIPSKFSEKYlKGV---SGDIRLQVSSGKQWRVRC--VREGPGTKLTRGWANFVVENDLKEEDVCVFELLDIKDIVLKVTIF 395 577899999********7666...348***********..77777889*********************98779999999999 PP -S CS B3 98 rk 99 r+ XP_023007492.1 396 RA 397 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MENSVTAMAE SNEQHAAQSF DETSPAKKAG LFYKLVVTSI LQDKKLKIPK KFAKKFGDDL 60 SDLVTLVVPN GYRWVLELKR HGRSLWFEDG WHDFIRHHCI QVGQLLVFRF EGNSVFNFYM 120 FNLTSISNGS CNTSNASCEQ SPIALGKEAE CEKLVEIFGY SSLDPSHSSG KKAFCESSEQ 180 QKFHGSSNEA STKNFTHWFD TQNLHPPKDF DYTLKGLDKL QVLRSNGDIG IQFNGDGLAK 240 ARENLDFQFS NEIEEGARKK KLKVEPIDYY NEPLFEKKCG NIPHKITRMA FGVEEFKFSN 300 PFCWIVMRHS YVRRGFHLHI PSKFSEKYLK GVSGDIRLQV SSGKQWRVRC VREGPGTKLT 360 RGWANFVVEN DLKEEDVCVF ELLDIKDIVL KVTIFRAHDF PTKT

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MENSVTAMAE SNEQHAAQSF DETSPAKKAG LFYKLVVTSI LQDKKLKIPK KFAKKFGDDL  60
SDLVTLVVPN GYRWVLELKR HGRSLWFEDG WHDFIRHHCI QVGQLLVFRF EGNSVFNFYM  120
FNLTSISNGS CNTSNASCEQ SPIALGKEAE CEKLVEIFGY SSLDPSHSSG KKAFCESSEQ  180
QKFHGSSNEA STKNFTHWFD TQNLHPPKDF DYTLKGLDKL QVLRSNGDIG IQFNGDGLAK  240
ARENLDFQFS NEIEEGARKK KLKVEPIDYY NEPLFEKKCG NIPHKITRMA FGVEEFKFSN  300
PFCWIVMRHS YVRRGFHLHI PSKFSEKYLK GVSGDIRLQV SSGKQWRVRC VREGPGTKLT  360
RGWANFVVEN DLKEEDVCVF ELLDIKDIVL KVTIFRAHDF PTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-52	B3 family protein