PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007149.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 559aa MW: 63813.6 Da PI: 8.3721

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.7	1.7e-10	508	556	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_023007149.1 508 KRWSLLEEDTLRTAVQRFGKGNWKLILNSYReifDERTEVDLKDKWRNM 556 69******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDKDVCRWII EFILRSSMND QLLKRTLAIM PFPDNDFRLK KTVLLRAIES ERSEAIVTEK 60 VLAIFEMIEQ LDKTEGLAMM DSMKSAYCAV AVECTVKYLA VEGMKNNGKY FDTVSRIWRG 120 RVMELKRSGR SELVSRELEE WKDKVEAALW DKTVWKKLVN MNSRYEALKL IGDYLGEAWG 180 VLGPSFLELS ASLMDNRTRN EMQSVQLEQA IHKTAVVSED VGGSGGIELP SQTENHAKRE 240 HQGSVPVLTR AETKRNDVLD INQDSGVNDN SKRSSTVEMN TERVQELPTE TTEGKESVEK 300 EVTVLQDPSP NCRKNLKTSV LPRCKSLASH KRVRGGAKIG HLEDLENDSS SGKSTCLQTP 360 EFDRVREAFK TSSLELQALV KDPLPDALRI AESVAQDLAK KNKTPEHSLE DQNDAVAANP 420 AINKDNMPLQ SMNTAFNNPR HGHQTIVPRP SIMERNSSAC TYEWNDSIDG SPERNRASRL 480 HLPSPKRKVI SPLKKYEETR LVWRRKCKRW SLLEEDTLRT AVQRFGKGNW KLILNSYREI 540 FDERTEVDLK DKWRNMTRY

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDKDVCRWII EFILRSSMND QLLKRTLAIM PFPDNDFRLK KTVLLRAIES ERSEAIVTEK  60
VLAIFEMIEQ LDKTEGLAMM DSMKSAYCAV AVECTVKYLA VEGMKNNGKY FDTVSRIWRG  120
RVMELKRSGR SELVSRELEE WKDKVEAALW DKTVWKKLVN MNSRYEALKL IGDYLGEAWG  180
VLGPSFLELS ASLMDNRTRN EMQSVQLEQA IHKTAVVSED VGGSGGIELP SQTENHAKRE  240
HQGSVPVLTR AETKRNDVLD INQDSGVNDN SKRSSTVEMN TERVQELPTE TTEGKESVEK  300
EVTVLQDPSP NCRKNLKTSV LPRCKSLASH KRVRGGAKIG HLEDLENDSS SGKSTCLQTP  360
EFDRVREAFK TSSLELQALV KDPLPDALRI AESVAQDLAK KNKTPEHSLE DQNDAVAANP  420
AINKDNMPLQ SMNTAFNNPR HGHQTIVPRP SIMERNSSAC TYEWNDSIDG SPERNRASRL  480
HLPSPKRKVI SPLKKYEETR LVWRRKCKRW SLLEEDTLRT AVQRFGKGNW KLILNSYREI  540
FDERTEVDLK DKWRNMTRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	6e-23	MYB_related family protein