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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023006798.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 519aa MW: 57696.6 Da PI: 6.5099 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 336.1 | 6.3e-103 | 147 | 518 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPil 91 l +lL++cAeav+ +d + a+ lL++l+ +a g+++qR+a++f+++La rla ++ y + ++++++++ +++ al+l +e+ P + XP_023006798.1 147 LLHLLVACAEAVACRDRSHASILLSELRANALVLGSSFQRVASCFVQGLADRLALVQPLGYVGFglpmMSRADHSSERKKKDEALNLIYEIYPHI 241 579***************************************************977766665531113333344445556667777******** PP GRAS 92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182 +f+h++a + Ile +ege+ vH++D+++ +G QW +L+++La+ p+ lR+Tg+g s ++++ +ge+L++ Aee+gv++e + v XP_023006798.1 242 QFGHFVAKSSILEVFEGENSVHVLDLGMAfglpYGHQWRSLIESLAECPNR-QLLRVTGIGL----SVNRYRLMGEKLKSHAEEFGVQVEVLA-V 330 *************************87762222678***********9876.89********....9************************99.7 PP GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 + +le+l++++++++ gEal++ +++q+h +++es +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ XP_023006798.1 331 EGNLENLRPQDIKLHDGEALVITSIFQMHGVVKESRGALT---SVLRMIYDLSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 422 99*****************************977665555...8*************************************************** PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371 + r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++ +++qak + k+k s+ y+v ee+g+lvlgWk++p+v++S XP_023006798.1 423 YDTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPIK--VMAQAKQWIGKFKaSESYTVVEEKGCLVLGWKSKPIVAAS 515 ***************************************************95..899**********9999*********************** PP GRAS 372 aWr 374 +W+ XP_023006798.1 516 CWK 518 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 519 aa Download sequence |
MASDADGGSF LSTDFRKEAE EGVDHSGTAH ELCLPHRRHC LSLMDDTAAS RWVISFSDEF 60 RHHKKFKLEP DSIAIDDGGA SSTNGSTSLS LSRSSSSDSL STGFRAHIWT YNQRYVAAEA 120 VEEAAAAIIN AEESAAEEDA SADGMRLLHL LVACAEAVAC RDRSHASILL SELRANALVL 180 GSSFQRVASC FVQGLADRLA LVQPLGYVGF GLPMMSRADH SSERKKKDEA LNLIYEIYPH 240 IQFGHFVAKS SILEVFEGEN SVHVLDLGMA FGLPYGHQWR SLIESLAECP NRQLLRVTGI 300 GLSVNRYRLM GEKLKSHAEE FGVQVEVLAV EGNLENLRPQ DIKLHDGEAL VITSIFQMHG 360 VVKESRGALT SVLRMIYDLS PKALVLVEQD SNHNGPFFLG RFMEALHYYS AIFDSLDAML 420 PKYDTRRAKI EQFYFAEEIK NIVSCEGMAR VERHERVDQW RRRMSRAGFQ AAPIKVMAQA 480 KQWIGKFKAS ESYTVVEEKG CLVLGWKSKP IVAASCWKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 5e-72 | GRAS family protein |