PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006584.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 417aa MW: 46254.1 Da PI: 5.7501

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.2e-12	251	297	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+++N++f Lr+++P+ +++Ka+ L Av YI+ L XP_023006584.1 251 TNHVEAERQRREKLNKRFYALRSVVPNV-----SRMDKASLLWDAVSYINAL 297 68***********************6.....4*************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MEEPVVSPSS SSLHHRLQFL LHTQPLPWAY AIFWQTTTDH NGAVFLSWRE GHFQPSPMST 60 SSSSPEGSHS PPLLPDAPLD LEWFYMMSLT QSFAPADGLP GRSFCSGAAV WLTGPDELER 120 YDCQRAKEAK SHGIQTLLCV PIPYGVLELA SPQIIPEDWG LVQQVKSVLD SDISNFTNSS 180 SPLPFLDQDI NLEEIGFMSE APEEEVGRPD RGKSRRTESA GELELSDSDS PVGKAAGKRR 240 GRKRGRKENA TNHVEAERQR REKLNKRFYA LRSVVPNVSR MDKASLLWDA VSYINALKGK 300 VEEMELEVRK LKKGGGEGVE KQSTTTSEEE EQGKGSTLFD VEVKRMGGGD AMVRVESHNQ 360 NCPSATLMGA LRDLEVHIHH ANITNVNDLM LQDVLIKLPH GFSTDEAFKA ALLSKLH

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MEEPVVSPSS SSLHHRLQFL LHTQPLPWAY AIFWQTTTDH NGAVFLSWRE GHFQPSPMST  60
SSSSPEGSHS PPLLPDAPLD LEWFYMMSLT QSFAPADGLP GRSFCSGAAV WLTGPDELER  120
YDCQRAKEAK SHGIQTLLCV PIPYGVLELA SPQIIPEDWG LVQQVKSVLD SDISNFTNSS  180
SPLPFLDQDI NLEEIGFMSE APEEEVGRPD RGKSRRTESA GELELSDSDS PVGKAAGKRR  240
GRKRGRKENA TNHVEAERQR REKLNKRFYA LRSVVPNVSR MDKASLLWDA VSYINALKGK  300
VEEMELEVRK LKKGGGEGVE KQSTTTSEEE EQGKGSTLFD VEVKRMGGGD AMVRVESHNQ  360
NCPSATLMGA LRDLEVHIHH ANITNVNDLM LQDVLIKLPH GFSTDEAFKA ALLSKLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	239	247	RRGRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	3e-53	bHLH family protein