PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006449.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 514aa MW: 56562.7 Da PI: 5.3111

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	3.9e-14	302	348	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr+l+P++ +K + a+i+ A++YIk+L XP_023006449.1 302 TKHFATERQRRVQLNDKYKALRSLVPSP-----TKTDRASIVGDAINYIKEL 348 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MYEETACSDP NSMSAEPTPP GVRDASENGF PQTMAHIPTL PSFPPPLIVG GGQDSHANFD 60 DNNLNLSMEE ISYHHHHRSG GGGDAMELEF QQQAVGFDNC NMNPSFGQEV SSDSNRMVCL 120 DQSAWAGTQI QEMGFNHHLI QSQDHQFSDS AMAAAYTQAP DLLNFFNMPA ARCSNNSSIS 180 FSNNTISNLH SSAMGGFLAD LPAGDGSNPS STSLSILYDP LFHLNLPPQP PLFRELFHSL 240 PHGYGLPAAS SRGRGGSLFP EGEIMEREGT AGVYEDGDGS GVLEFSRDMA DCIGKGRDGK 300 MTKHFATERQ RRVQLNDKYK ALRSLVPSPT KTDRASIVGD AINYIKELLR EVKELKLLVE 360 KKRCSRERSK RHRTAEEDGS AWDVESSNAK TVAVGDGGED QSYNLRSSWL QRKTKDTEVD 420 VRIVDDEVTI KLVQRKLNCL LLVSKLLDDL QLDLHHVAGG HIGDYYSFLF NTKIYEGSSV 480 YASAIANKVM EAVDRQYNNT NTANTSITPH TNTY

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MYEETACSDP NSMSAEPTPP GVRDASENGF PQTMAHIPTL PSFPPPLIVG GGQDSHANFD  60
DNNLNLSMEE ISYHHHHRSG GGGDAMELEF QQQAVGFDNC NMNPSFGQEV SSDSNRMVCL  120
DQSAWAGTQI QEMGFNHHLI QSQDHQFSDS AMAAAYTQAP DLLNFFNMPA ARCSNNSSIS  180
FSNNTISNLH SSAMGGFLAD LPAGDGSNPS STSLSILYDP LFHLNLPPQP PLFRELFHSL  240
PHGYGLPAAS SRGRGGSLFP EGEIMEREGT AGVYEDGDGS GVLEFSRDMA DCIGKGRDGK  300
MTKHFATERQ RRVQLNDKYK ALRSLVPSPT KTDRASIVGD AINYIKELLR EVKELKLLVE  360
KKRCSRERSK RHRTAEEDGS AWDVESSNAK TVAVGDGGED QSYNLRSSWL QRKTKDTEVD  420
VRIVDDEVTI KLVQRKLNCL LLVSKLLDDL QLDLHHVAGG HIGDYYSFLF NTKIYEGSSV  480
YASAIANKVM EAVDRQYNNT NTANTSITPH TNTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	2e-55	bHLH family protein