PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006103.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 210aa    MW: 22818.3 Da    PI: 7.1003
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.21.3e-38111111100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf +eq +++fa+vhk+FGasn +kll ++p ++r da  +l+yeA ar+rdPvyG+v++i++lqqq+ +l+ael
  XP_023006103.1  11 PCGACKFLRRKCVKGCIFAPYFDSEQgAAHFAAVHKVFGASNASKLLLRIPANKRLDACVTLCYEALARVRDPVYGCVAHIFSLQQQVVNLQAEL 105
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                     a+++++
  XP_023006103.1 106 AYIQAK 111
                     *99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSSAGVHGGG PCGACKFLRR KCVKGCIFAP YFDSEQGAAH FAAVHKVFGA SNASKLLLRI  60
PANKRLDACV TLCYEALARV RDPVYGCVAH IFSLQQQVVN LQAELAYIQA KLSTLQRLLP  120
PPLHSPSSTA RHNPLPETTP ASDMGLLPNV PMLLDPLQTQ LGCNETTSSF LNPIDHEDEM  180
DEDGELQCLA REFVSRYLPG VGFRPPCSQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00210.16e-69LBD family protein