PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005948.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 294aa MW: 32997.8 Da PI: 8.7698

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.6e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_023005948.1 14 RGPWSPEEDAKLKHYIQKHGTGgNWISLPQKSGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	41.7	2.6e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++++++ G++ W+ Ia ++ gRt++++k++w++ XP_023005948.1 69 GDFSEEEDRVIYHLFTTIGSR-WSVIATQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGRTPCCDKA NVKRGPWSPE EDAKLKHYIQ KHGTGGNWIS LPQKSGLKRC GKSCRLRWLN 60 YLRPDIKHGD FSEEEDRVIY HLFTTIGSRW SVIATQLPGR TDNDIKNYWN TKLKKKLMST 120 NNISSQKTTP HGLLSHFLQT SSTNSSSSSS PSSYSDHSNF PSFPNPNGTF STLLEPISFS 180 ASLLNPTNLI STNNNTSQDQ TFIVNPNRAQ NNYDAKSDHG LLVFGRDQAS CSSSDAEYGT 240 RGIGVKDEKK RMSFVKQFHD HEMWMEASPL MDYGLEEIKQ LITSSSCSNV FLDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	3e-74	MYB family protein