PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005765.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 436aa MW: 47556.6 Da PI: 8.1452

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8e-13	272	317	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L XP_023005765.1 272 NHVEAERQRRQKLNHRFYALRSVVPNV-----SKMDKASLLADAVIYINEL 317 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MDDSPNSMAS TLQQKLQFIL HNRHEWWAYS IFWIASKDHL TQNLVFNWRD GHFRGTRDFV 60 ARPSKPLSGN AQLISFGFDE AAVDQRKRTD FVDLEWYYTL SVTRLFNMTD NVVGRVFDSG 120 TYVWLTADDG LDLYECERVK EARMKGIQTL VFVSISGGVL ELGSSELIKQ DWSLAQFAKS 180 VFGCGFANFA PFQEKNQEEG GGGGLIEAHA PPCSAVTKGE MGSSGGGAGG GGGGSSSDSL 240 SGNSDGNFIS NIDNKRGRRP TKSKTESTPP VNHVEAERQR RQKLNHRFYA LRSVVPNVSK 300 MDKASLLADA VIYINELKSK VQSLEAMLGG GRGGGGNGGS SGGGGTLEKN CVMNSKNNVE 360 VKIIGSEAMV RVQCRDENHP SARLLNVLRD LGLQIHHASL SSVNDLMLQD VVVRVPQGVV 420 LGEKALRIAL LQRLQC

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MDDSPNSMAS TLQQKLQFIL HNRHEWWAYS IFWIASKDHL TQNLVFNWRD GHFRGTRDFV  60
ARPSKPLSGN AQLISFGFDE AAVDQRKRTD FVDLEWYYTL SVTRLFNMTD NVVGRVFDSG  120
TYVWLTADDG LDLYECERVK EARMKGIQTL VFVSISGGVL ELGSSELIKQ DWSLAQFAKS  180
VFGCGFANFA PFQEKNQEEG GGGGLIEAHA PPCSAVTKGE MGSSGGGAGG GGGGSSSDSL  240
SGNSDGNFIS NIDNKRGRRP TKSKTESTPP VNHVEAERQR RQKLNHRFYA LRSVVPNVSK  300
MDKASLLADA VIYINELKSK VQSLEAMLGG GRGGGGNGGS SGGGGTLEKN CVMNSKNNVE  360
VKIIGSEAMV RVQCRDENHP SARLLNVLRD LGLQIHHASL SSVNDLMLQD VVVRVPQGVV  420
LGEKALRIAL LQRLQC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	336	GGGRGGGG
2	330	337	GGGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-52	bHLH family protein