PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005733.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 544aa MW: 59788.9 Da PI: 6.8204

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.9	2.7e-18	163	249	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ ++l+rg+l++ +Weev++ + r ++ ++s +qCk+k +nl+kryk ++++++++ s s++p+++q+e XP_023005733.1 163 EWSDAAISCLLDAYTEKFTQLNRGNLRGRDWEEVAATVseRCEKQSKSVEQCKNKVDNLKKRYKLERQRMSNG-GISISHWPWYKQME 249 5***********************************777778899********************99.677889*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MASCDDDFSL LSDDHHHHNH HQSTTNHHHI PNPQHIHQSY VPHRFTPRSS SVHPPPPPPP 60 STQAAQPILA PSGSPKKIGG RIDKEEEEEE DDGEDYGDAT FCSSSFGNGD QNRIGVGVGV 120 DVDVRVEKRK DQSDELGEEG GSYSYKRAKP SPSGGEYRKD REEWSDAAIS CLLDAYTEKF 180 TQLNRGNLRG RDWEEVAATV SERCEKQSKS VEQCKNKVDN LKKRYKLERQ RMSNGGISIS 240 HWPWYKQMEQ IVGNSLTMKV VSDEDRSVGS SATTPRISKR YVIPAPNTTG HMNNLKPKSV 300 SSPRWRRVVF KISGTALTGT GPNNIDPKVT MAIAREVVIA CRLGVEVAIV VGGRNFFCGD 360 SWVTATGLDR CTAYQIGMMA TLMNSILLQS AIENMGVQTR VQSAFMLHEV AEPYSRQRAI 420 RHLEKGRVVI FGGIGTGTGN PLFFTDTAAA LRASEIHAEA VLKGTNADGV YDCSSQDNNF 480 TFKHISFREL ASRGATSMDV TALTFCEENN IPVVVFNLLE PGNISKALCG DQVGTLIDQN 540 GGIS

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MASCDDDFSL LSDDHHHHNH HQSTTNHHHI PNPQHIHQSY VPHRFTPRSS SVHPPPPPPP  60
STQAAQPILA PSGSPKKIGG RIDKEEEEEE DDGEDYGDAT FCSSSFGNGD QNRIGVGVGV  120
DVDVRVEKRK DQSDELGEEG GSYSYKRAKP SPSGGEYRKD REEWSDAAIS CLLDAYTEKF  180
TQLNRGNLRG RDWEEVAATV SERCEKQSKS VEQCKNKVDN LKKRYKLERQ RMSNGGISIS  240
HWPWYKQMEQ IVGNSLTMKV VSDEDRSVGS SATTPRISKR YVIPAPNTTG HMNNLKPKSV  300
SSPRWRRVVF KISGTALTGT GPNNIDPKVT MAIAREVVIA CRLGVEVAIV VGGRNFFCGD  360
SWVTATGLDR CTAYQIGMMA TLMNSILLQS AIENMGVQTR VQSAFMLHEV AEPYSRQRAI  420
RHLEKGRVVI FGGIGTGTGN PLFFTDTAAA LRASEIHAEA VLKGTNADGV YDCSSQDNNF  480
TFKHISFREL ASRGATSMDV TALTFCEENN IPVVVFNLLE PGNISKALCG DQVGTLIDQN  540
GGIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein