PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005356.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 471aa MW: 52139.2 Da PI: 7.3263

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.1	7.2e-36	54	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023005356.1 54 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 146 799**********.99*****5553334444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023005356.1 147 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 196 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MRNSKIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGGRPRVYQD WVGLPAGVKF 60 DPTDQELIEH LEAKVKAKDM KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV SRDGLSRHFF 120 HRPSKAYTTG TRKRRKIQTE CDLQGGETRW HKTGKTRPVM ASGKQKGCKK ILVLYTNFGK 180 NRKPEKTNWV MHQYHLGQHE EEKEGELVVS KIFYQTQPRQ CNWSDRSLAA AETGFEVAAS 240 GSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGLEEGSTG 300 RKMGMKGRTS GGACSSSGEF ELRDHHHQLV VAHNDHHRSI VHHHLPTAAF HISNHPSHQI 360 SAIISPPPPP PLLLLDHDSF HHPSPIIIQN QQFHQQQQQQ QEEGESEHHK MGGRSASGLE 420 ELIMGCTSSS SSSIKHHPPE SSILSSREAD QWMKYSSFWP ESDNPNLHGH G

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MRNSKIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGGRPRVYQD WVGLPAGVKF  60
DPTDQELIEH LEAKVKAKDM KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV SRDGLSRHFF  120
HRPSKAYTTG TRKRRKIQTE CDLQGGETRW HKTGKTRPVM ASGKQKGCKK ILVLYTNFGK  180
NRKPEKTNWV MHQYHLGQHE EEKEGELVVS KIFYQTQPRQ CNWSDRSLAA AETGFEVAAS  240
GSCSSMAQAD EMSPAGGGVG ASISSFSSLD IQHLKSDHFG FGPFRTTSFD EVGLEEGSTG  300
RKMGMKGRTS GGACSSSGEF ELRDHHHQLV VAHNDHHRSI VHHHLPTAAF HISNHPSHQI  360
SAIISPPPPP PLLLLDHDSF HHPSPIIIQN QQFHQQQQQQ QEEGESEHHK MGGRSASGLE  420
ELIMGCTSSS SSSIKHHPPE SSILSSREAD QWMKYSSFWP ESDNPNLHGH G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-137	NAC family protein