PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | WRKY | ||||||||
Protein Properties | Length: 578aa MW: 63575.4 Da PI: 6.6625 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.7 | 8.5e-32 | 222 | 279 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++v+i+Y+g+H+h+k XP_023005349.1 222 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQIVDIIYKGTHDHPK 279 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.2 | 3.4e-33 | 397 | 455 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023005349.1 397 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 455 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 578 aa Download sequence |
MDPTDADLAD PSHVRLSVSS EPSSASAAGA KYKLLSPAKL PISRSPCITI PPGLSPTSFL 60 ESPVLLTNLK VEPSPTTGSF TKLPMAHDSS SSAIYSMTTM AFSNTHASDE GRSSYFEFKP 120 YAGPNMVPAD LSHRKGEQSR EVQVQGQPQS FTAPPMTKSE INVISNDLSR STQMDTVASR 180 ASVPEVDGDD FNHSLNTNTR VQPPQSDPKA SGIQVVSDRL SDDGYNWRKY GQKHVKGSEF 240 PRSYYKCTHP NCEVKKLFER SHDGQIVDII YKGTHDHPKP QPSRRYSASA SMNVQEDGPD 300 KPSPLTGQDD RSCVMYAQAV HTIEPNGTPE PSHAANDSMA EGVGTTLPPR SHDEVDDDDI 360 FSKRRKMELG GFDVCPMVKP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY 420 YKCTNVGCPV RKHVERASHD PKAVITTYEG KHNHDVPTAK TSSHEVQGSL TIAPSRYRLE 480 ESDTISLDLG VGIGAGGENR SNEYRQAFHS QLAENQNPNG NFNFEIVQEN SPPTYFGVLD 540 RGISQHGSRE SLSESRTMSL NHSSHPYPPS IERILTGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.2 | 0.0 | WRKY family protein |