PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Dof | ||||||||
Protein Properties | Length: 238aa MW: 26122.9 Da PI: 8.8418 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.2 | 3.6e-38 | 25 | 85 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ ++cprC+s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rk++ks+ XP_023005072.1 25 PKEPRSCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPVGGGSRKSRKST 85 578899***************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MNQKINSKPS SRLSSSLLSS SREAPKEPRS CPRCKSNNTK FCYYNNYSLT QPRYFCKSCR 60 RYWTEGGSLR NVPVGGGSRK SRKSTTTTSC SSSSSSSDHF KNKNNNSNAR LPNYPSSQDL 120 NVAFPCAMTH FVEVPKVVEN MNNGFRGLSS FIPNLMPNSN NIDADLGYHS LPLDEFKPSL 180 GINCVDGFGG GPNLVGFQEL NQNSCGEPNE CDDHQKERQQ GNNISSGFWS GMLGGGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.2 | 2e-34 | Dof family protein |