PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004951.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ARF
Protein Properties Length: 680aa    MW: 75917.5 Da    PI: 6.0519
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.84.8e-24125226199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+lt sd++++g +++ kk+a+e+     +++++ +++l  +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF   + +++
  XP_023004951.1 125 FCKILTASDTSTHGGFSVLKKHATEClppldMSQSTPTQELAAKDLHGHEWKFKHIFRGQPRRHLLTTGWSTFVVSKRLVAGDAFVFL--RGDNG 217
                     99****************************9555555669************************************************..34899 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_023004951.1 218 ELRVGVRRQ 226
                     99****996 PP
2Auxin_resp94.91.3e-31251330183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F v+Y+Pr+  s+F++ ++k+++++k+ + vGmRfkm+fe+e+s+err++Gt+vgv d++p  W++S+WrsLk
  XP_023004951.1 251 ASHAVRTQTFFVVYYKPRT--SQFIIGLNKYLETIKNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDISP-IWSDSNWRSLK 330
                     689***************6..9*************************************************.8********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    
MTLSEQNPAE FHKGLEGEGL FEELWKACAG PLVEVPFNGE RVFYFPQGHM EQLEESTNHE  60
LNHQIPHFDL PSKILCRVVN IRLLAEKETD EVYAQITLQP EADQSEPQCP DPEPPERTRP  120
TVHSFCKILT ASDTSTHGGF SVLKKHATEC LPPLDMSQST PTQELAAKDL HGHEWKFKHI  180
FRGQPRRHLL TTGWSTFVVS KRLVAGDAFV FLRGDNGELR VGVRRQARQQ SLMPSSVISS  240
HSMHLGVLAT ASHAVRTQTF FVVYYKPRTS QFIIGLNKYL ETIKNGYEVG MRFKMRFEGE  300
ESPERRFTGT IVGVGDISPI WSDSNWRSLK IQWDEAAAIQ RPERVSPWEI EPFAPSASLN  360
FTHPSIKSKR ARPVEVPPPE NTSSSTPTGF WLHGSTIPHE IPQLSGANDV PSSGNQVVWS  420
LWQQTLDVNV DSCRSHCNPM AHVEGIWPSP PPPLCNNSLN PLPSPYSPSS TSKPSSELNE  480
HDQSEKGNKP DISLGCRIFG IDLKTNSSIV PSLEKKSCCQ TTVATDSAKD PVPTAAVTSQ  540
ADAGKEQQQV ASELSMKGTQ TIHIPNSSSR TRTKVQMQGV AVGRAVDLTT LKGYEDLIDE  600
LENVFEIKGE LREMNKWSVV FTDDEYDMML VGDDPWPEFC KMVKRIFIYS SEEVKTMSSN  660
SKLVSPPSLD SLDSERKTES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.20.0ARF family protein