PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004607.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 312aa    MW: 35223.8 Da    PI: 8.1224
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.21.1e-32163218258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_023004607.1 163 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 218
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MFFLLGWQNK FQTMPSKPGI VEQEVVDGAK YLLQSTKYSE PWWHGVGNNT ITDEDATKTS  60
SAEYLDVTVT SAAMLSQAND ENTGKEVQHL KYIPFSTSPP VGERLDPNSQ MELIGHSIVL  120
TSYPFSDAQC CQMLTSYGPQ TTLPHFYGLH HARMPLPLEM EAEPVYVNAK QYHGILRRRQ  180
SRAKAELEKK VIKSRKPYLH ESRHLHAMRR ARGSGGRFLN TKKPNSVISN KTMEEDINSG  240
INHVSEPVSE SGSNYMVANE NGMKDTLDGQ QKEDKEFMPQ NMQITHAFFN GGKSNGQVYP  300
HTIQNLLMKA CR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.14e-42NF-YA family protein