PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004166.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 732aa MW: 79810.5 Da PI: 6.5124

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.4	1.8e-14	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_023004166.1 24 RERWTEEEHGRFLEALKLYGRA-WPRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHGRFLEALK LYGRAWPRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKSPI SMLGANDGKL 120 STLVSSLQSK QILDLEKKPM NEATSGEEQT FNEKDTHDDN CSEVFTLSGE ANSFSLKNQH 180 SVPVQVKFND SCAFREFVPS VKEPLHEKGM GKLSELVISS ASREKLVSAE KKEALSCALS 240 GDEMQAAHNY PRHVPVHVVD GSLGANGQGS LRDAPLQESA FHPSMEIQGE RSILRNPSGS 300 ISFEHQHNAP GSIYQSYPPI HPTPFTLLHP NQEHYKSVLQ MSSAFLNLIV STLQQNPAAH 360 AIASLTATCW PYVNPETSAD ASACDTEGSK TKQMNPTPSK EAIAVATVAA ATAWWAAHGL 420 PPLCSPLHSA FTSAAISAPV VQSSDACPNS ESKDKAESSL QNAALQNQQL DAEQSEVLTA 480 HQSGSKSPTH SSSDSGNGGA DANATVKPVH NEKTPAEVEF HDSNEEKRGK QVDRSSCGSN 540 TPSGSDREMY ATEKNDEKEK GKELETNHPA PESSIRRSRS ISNTSESWKE VSDEVKRGRL 600 AFQALFTRDV LPQSFSPPYD VESENKENEN VEKVSQSVDK DNSGASVLDL NSNTCGTSTS 660 AIGVNNGEGE FPSIGLGNGT PKVCRTGFKP YKRCSVEAKE KRMTATSSNH NEEGGQKRLR 720 LDQKASNCCM YF

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHGRFLEALK LYGRAWPRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKSPI SMLGANDGKL  120
STLVSSLQSK QILDLEKKPM NEATSGEEQT FNEKDTHDDN CSEVFTLSGE ANSFSLKNQH  180
SVPVQVKFND SCAFREFVPS VKEPLHEKGM GKLSELVISS ASREKLVSAE KKEALSCALS  240
GDEMQAAHNY PRHVPVHVVD GSLGANGQGS LRDAPLQESA FHPSMEIQGE RSILRNPSGS  300
ISFEHQHNAP GSIYQSYPPI HPTPFTLLHP NQEHYKSVLQ MSSAFLNLIV STLQQNPAAH  360
AIASLTATCW PYVNPETSAD ASACDTEGSK TKQMNPTPSK EAIAVATVAA ATAWWAAHGL  420
PPLCSPLHSA FTSAAISAPV VQSSDACPNS ESKDKAESSL QNAALQNQQL DAEQSEVLTA  480
HQSGSKSPTH SSSDSGNGGA DANATVKPVH NEKTPAEVEF HDSNEEKRGK QVDRSSCGSN  540
TPSGSDREMY ATEKNDEKEK GKELETNHPA PESSIRRSRS ISNTSESWKE VSDEVKRGRL  600
AFQALFTRDV LPQSFSPPYD VESENKENEN VEKVSQSVDK DNSGASVLDL NSNTCGTSTS  660
AIGVNNGEGE FPSIGLGNGT PKVCRTGFKP YKRCSVEAKE KRMTATSSNH NEEGGQKRLR  720
LDQKASNCCM YF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	2e-98	MYB_related family protein