PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004094.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 340aa MW: 38133.9 Da PI: 5.3517

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.5	8.8e-12	160	206	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + K +Ka+iL Av+Y+k+Lq XP_023004094.1 160 EHVLAERKRREKLSQRFIALSALIPGL-----NKIDKASILGGAVRYVKELQ 206 5999********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MEISSTKWVS EWEMEDAPYF MDEFQVHPFE FSFDEMKFEE NGRRDFYGST DPPSAVAERV 60 VKQLMVEVEG KGATSQGFAP KADSSSSSSH IISFEKLNCK AGKGCDVKGS VEPKIEMAYE 120 YDGNLNFSTL ITESWNNEYS RQGVQKAAGS ANRNPFHARE HVLAERKRRE KLSQRFIALS 180 ALIPGLNKID KASILGGAVR YVKELQERLK VVEEQAAISE VSEEQSTVYV KRRSPVSSSD 240 DDDTISSEEN SFSGRPVPEI EARVSNKDVL IRIHCHKRKG CLSYLLGKIE NLNLTILSSS 300 ALPFAHSKLD ITIVAQVDDG FCMKVEDVVK NLRQALLDFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	170	ERKRRE
2	166	171	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	9e-50	bHLH family protein