PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003941.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 334aa    MW: 37212.3 Da    PI: 6.4118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-0961108354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL+ +++ +k+L
  XP_023003941.1  61 IQKADREKLRRDRLNEHFLELGNTLDPD----RPKNDKATILTDTIQMLKDL 108
                     56789********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEQWKTGDFS QSIVTADLVP SSSLPPQPLS LPSSRHHNNQ LPESRLRTDE EVKDPVAVRK  60
IQKADREKLR RDRLNEHFLE LGNTLDPDRP KNDKATILTD TIQMLKDLTA EVNRLKADYE  120
ALSEESRELT QEKNELREEK ASLKSDIENL NAQYQQRLRV MFPWATMDPS VVMGPPYSYP  180
VPVPVPPGPI PMHPSLQPFT FFGSQNPGAI PNPCSTFVPY TAAANHPIEQ PSAQYASNSH  240
ISSKQDSRSK SSDHPKRSNV ERCDESNDVA TDLELKMPGS STQQDASSAS KKGKQSQRKE  300
KSVTDCSSSS RFSSSQVLQD SSSNSVGDIP KQNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.22e-73bHLH family protein