PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003834.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 594aa    MW: 65663 Da    PI: 4.5612
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.64.1e-1132265942374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+ecA+ +s+++ ++a ++  +l+e +s++gdp++R+a+yf+eAL +rl+    ++ + l +se++   s++ + ++k++++++P+ kf+hl
  XP_023003834.1 226 LKTLIECAR-LSESEPNRAAQIFIQLKESSSEHGDPTERVAFYFLEALYRRLSL---QTENRLVCSEST---SDDFTISYKALNDACPYSKFAHL 313
                     689******.566688899999*******************************9...899999***999...99********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIle +e+++++HiiDf+isqG+QW+aLlqaLa+R++g+p  +Ri g+ +p  g   +++l +tg+rLa+fA+ l+++fef+  + + +e+
  XP_023003834.1 314 TANQAILEMTENASKIHIIDFGISQGVQWAALLQALATRSSGKPtGIRISGIPAPMLGncPATALFATGNRLAEFAKLLELNFEFDR-ILTPIEE 407
                     ****************************************887769********9999999**************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++r++++E+laVn++lql++llde+  l     +vL+l kslsP++v++ e ea++n+  F++rf +a++yysa+f+sl+ klpr+s+er 
  XP_023003834.1 408 LKESSFRIESDETLAVNFMLQLYNLLDETPRLVL---NVLRLAKSLSPRIVTLGEYEASLNRVGFFNRFKNAVRYYSAVFESLDPKLPRNSNERL 499
                     *******************************999...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      +E+ +lgr+i ++v  e +   ++er+e +e+W++++e++GF++v+ls++a +qa+ ll k++ s +y++ e+s  ++ l W++ p+++vS+Wr
  XP_023003834.1 500 QLEKLVLGRQIGDIVGPESSPgaKIERMEDKEQWKMMMENCGFEAVNLSHYAKSQAQILLWKYDySCEYSLIESSPGFLsLAWNQVPIITVSSWR 594
                     ****************99886669****************************************9999*99999888888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MANMCADSGN LMAIAQQVMK QKQQQEQQQP PQEPPPQQLT SPSTFTLNPW SGSNHGLSSP  60
DLGFGLAGAG FSDPFQVQRV VDGGETSFQF PNLEHHSSSF RYPDFDGGAA ADFDSDEWME  120
SLMAGGDSTD SSNLPSGCDA WQANSDIALY GDDPFVPCPS RLTIPCSSPS DLNRVIFPEP  180
PKNQAAIQPP VVSWTGLTPK TPPVVVKDTN GCSSSSAENE PTTPLLKTLI ECARLSESEP  240
NRAAQIFIQL KESSSEHGDP TERVAFYFLE ALYRRLSLQT ENRLVCSEST SDDFTISYKA  300
LNDACPYSKF AHLTANQAIL EMTENASKIH IIDFGISQGV QWAALLQALA TRSSGKPTGI  360
RISGIPAPML GNCPATALFA TGNRLAEFAK LLELNFEFDR ILTPIEELKE SSFRIESDET  420
LAVNFMLQLY NLLDETPRLV LNVLRLAKSL SPRIVTLGEY EASLNRVGFF NRFKNAVRYY  480
SAVFESLDPK LPRNSNERLQ LEKLVLGRQI GDIVGPESSP GAKIERMEDK EQWKMMMENC  540
GFEAVNLSHY AKSQAQILLW KYDYSCEYSL IESSPGFLSL AWNQVPIITV SSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein