PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003806.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 224aa    MW: 24749.8 Da    PI: 9.3561
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.6e-32129185158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+e+k   ksrkpylheSRh hAlrR+Rg+gGrF
  XP_023003806.1 129 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKSRKPYLHESRHLHALRRARGCGGRF 185
                     69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGAKSTCYVS RGVHYNPMTS SVHDYSDNGE ADKLQKYSES QNNSSSVING LNQPSITTSN  60
QYLTPLQVGA GHALAPPAYP YPDPYYRSIF SPYDAQPYPP QPYGGQPMVH LQLMGIQQAG  120
VPLPTDAVEE PVFVNAKQYH GILRRRQSRA KAESENKALK SRKPYLHESR HLHALRRARG  180
CGGRFLKSNK NENQQNEVAS AHASNCKEIE VPIPASAVLV ILHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.27e-54NF-YA family protein